Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Msh4Q99MT2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.48■□□□□ 0.39
Msh4Q99MT2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Msh4Q99MT2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Msh4Q99MT2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.47■□□□□ 0.39
Msh4Q99MT2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
Msh4Q99MT2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh4Q99MT2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.46■□□□□ 0.39
Msh4Q99MT2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.46■□□□□ 0.39
Msh4Q99MT2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh4Q99MT2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.45■□□□□ 0.38
Msh4Q99MT2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.45■□□□□ 0.38
Msh4Q99MT2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.45■□□□□ 0.38
Msh4Q99MT2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.45■□□□□ 0.38
Msh4Q99MT2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.44■□□□□ 0.38
Msh4Q99MT2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.44■□□□□ 0.38
Msh4Q99MT2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh4Q99MT2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.43■□□□□ 0.38
Msh4Q99MT2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms