Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.67■□□□□ 0.58
TrabdQ99JY4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TrabdQ99JY4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TrabdQ99JY4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Mir7071-201ENSMUST00000184847 69 ntBASIC18.66■□□□□ 0.58
TrabdQ99JY4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.66■□□□□ 0.58
TrabdQ99JY4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TrabdQ99JY4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.65■□□□□ 0.58
TrabdQ99JY4 Gm37055-201ENSMUST00000191866 133 ntBASIC18.65■□□□□ 0.58
TrabdQ99JY4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TrabdQ99JY4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TrabdQ99JY4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TrabdQ99JY4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TrabdQ99JY4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.64■□□□□ 0.57
TrabdQ99JY4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TrabdQ99JY4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Mir5122-201ENSMUST00000175004 89 ntBASIC18.63■□□□□ 0.57
TrabdQ99JY4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.63■□□□□ 0.57
TrabdQ99JY4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.63■□□□□ 0.57
TrabdQ99JY4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TrabdQ99JY4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Gm11643-201ENSMUST00000119578 864 ntBASIC18.62■□□□□ 0.57
TrabdQ99JY4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.62■□□□□ 0.57
TrabdQ99JY4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TrabdQ99JY4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TrabdQ99JY4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.61■□□□□ 0.57
TrabdQ99JY4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms