Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.16■□□□□ 0.5
Smarcd2Q99JR8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Mir5130-201ENSMUST00000175160 84 ntBASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcd2Q99JR8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcd2Q99JR8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcd2Q99JR8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcd2Q99JR8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcd2Q99JR8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 AA414768-201ENSMUST00000121924 1257 ntBASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcd2Q99JR8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 BC021767-201ENSMUST00000126387 1716 ntBASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcd2Q99JR8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Smarcd2Q99JR8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smarcd2Q99JR8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms