Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Gm10418-201ENSMUST00000100943 576 ntBASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Gm13401-201ENSMUST00000117074 291 ntBASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sf3b3Q921M3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sf3b3Q921M3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Gm24841-201ENSMUST00000158676 357 ntBASIC21.65■■□□□ 1.06
Sf3b3Q921M3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3b3Q921M3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.64■■□□□ 1.05
Sf3b3Q921M3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Gm10819-201ENSMUST00000099988 561 ntBASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3b3Q921M3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gm7638-201ENSMUST00000121348 967 ntBASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gm6345-202ENSMUST00000180900 204 ntBASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3b3Q921M3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sf3b3Q921M3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.61■■□□□ 1.05
Sf3b3Q921M3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3b3Q921M3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms