Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vsx1Q91V10 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vsx1Q91V10 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Gm45058-201ENSMUST00000205810 766 ntBASIC17.72■□□□□ 0.43
Vsx1Q91V10 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.72■□□□□ 0.43
Vsx1Q91V10 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.72■□□□□ 0.43
Vsx1Q91V10 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vsx1Q91V10 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.71■□□□□ 0.43
Vsx1Q91V10 Gm14859-201ENSMUST00000117752 357 ntBASIC17.71■□□□□ 0.43
Vsx1Q91V10 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Vsx1Q91V10 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.71■□□□□ 0.43
Vsx1Q91V10 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vsx1Q91V10 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vsx1Q91V10 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.7■□□□□ 0.42
Vsx1Q91V10 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vsx1Q91V10 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.69■□□□□ 0.42
Vsx1Q91V10 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vsx1Q91V10 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.68■□□□□ 0.42
Vsx1Q91V10 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vsx1Q91V10 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vsx1Q91V10 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms