Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm10698-201ENSMUST00000182663 604 ntBASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3kbp1Q8R550 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.47■□□□□ 0.55
Sh3kbp1Q8R550 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sh3kbp1Q8R550 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sh3kbp1Q8R550 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Gm6576-201ENSMUST00000169678 883 ntBASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Gm18666-201ENSMUST00000190039 958 ntBASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3kbp1Q8R550 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3kbp1Q8R550 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Sh3kbp1Q8R550 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3kbp1Q8R550 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms