Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sf3a1Q8K4Z5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Gm20760-201ENSMUST00000179197 648 ntBASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sf3a1Q8K4Z5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sf3a1Q8K4Z5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.91■■□□□ 1.1
Sf3a1Q8K4Z5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sf3a1Q8K4Z5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sf3a1Q8K4Z5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sf3a1Q8K4Z5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Sf3a1Q8K4Z5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sf3a1Q8K4Z5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.89■■□□□ 1.1
Sf3a1Q8K4Z5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Sf3a1Q8K4Z5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Fst-202ENSMUST00000223640 2612 ntBASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sf3a1Q8K4Z5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sf3a1Q8K4Z5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms