Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Paf1Q8K2T8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Paf1Q8K2T8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Paf1Q8K2T8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Gm11249-201ENSMUST00000117071 859 ntBASIC21■□□□□ 0.95
Paf1Q8K2T8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Paf1Q8K2T8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Paf1Q8K2T8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Paf1Q8K2T8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Paf1Q8K2T8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Gm27275-201ENSMUST00000184318 272 ntBASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Gm37856-201ENSMUST00000191634 999 ntBASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Paf1Q8K2T8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.97■□□□□ 0.95
Paf1Q8K2T8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Paf1Q8K2T8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Paf1Q8K2T8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Paf1Q8K2T8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
Paf1Q8K2T8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Paf1Q8K2T8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms