Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samd3Q8C4H2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.52■□□□□ 0.56
Samd3Q8C4H2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Samd3Q8C4H2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Samd3Q8C4H2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samd3Q8C4H2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samd3Q8C4H2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samd3Q8C4H2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Gm10418-201ENSMUST00000100943 576 ntBASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samd3Q8C4H2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.5■□□□□ 0.55
Samd3Q8C4H2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Samd3Q8C4H2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Timm23-208ENSMUST00000226683 750 ntBASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Samd3Q8C4H2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samd3Q8C4H2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms