Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2bQ8BJF9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Chmp2bQ8BJF9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2bQ8BJF9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2bQ8BJF9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chmp2bQ8BJF9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Chmp2bQ8BJF9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp2bQ8BJF9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chmp2bQ8BJF9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2bQ8BJF9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2bQ8BJF9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2bQ8BJF9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.3■□□□□ 0.52
Chmp2bQ8BJF9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms