Protein–RNA interactions for Protein: Q8BIG4

Fbxo28, F-box only protein 28, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fbxo28Q8BIG4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fbxo28Q8BIG4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fbxo28Q8BIG4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fbxo28Q8BIG4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fbxo28Q8BIG4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Fbxo28Q8BIG4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.33■□□□□ 0.84
Fbxo28Q8BIG4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Fbxo28Q8BIG4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fbxo28Q8BIG4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fbxo28Q8BIG4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fbxo28Q8BIG4 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fbxo28Q8BIG4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms