Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SpidrQ8BGX7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SpidrQ8BGX7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SpidrQ8BGX7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SpidrQ8BGX7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.96■□□□□ 0.95
SpidrQ8BGX7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.95■□□□□ 0.94
SpidrQ8BGX7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Gm6345-202ENSMUST00000180900 204 ntBASIC20.94■□□□□ 0.94
SpidrQ8BGX7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SpidrQ8BGX7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SpidrQ8BGX7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 AA414768-201ENSMUST00000121924 1257 ntBASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Tgds-204ENSMUST00000228543 1594 ntBASIC20.92■□□□□ 0.94
SpidrQ8BGX7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SpidrQ8BGX7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Gm13401-201ENSMUST00000117074 291 ntBASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SpidrQ8BGX7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SpidrQ8BGX7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.89■□□□□ 0.94
SpidrQ8BGX7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SpidrQ8BGX7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SpidrQ8BGX7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SpidrQ8BGX7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SpidrQ8BGX7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SpidrQ8BGX7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SpidrQ8BGX7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SpidrQ8BGX7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms