Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.28■□□□□ 0.36
Trim23Q8BGX0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim23Q8BGX0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim23Q8BGX0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim23Q8BGX0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim23Q8BGX0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim23Q8BGX0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim23Q8BGX0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim23Q8BGX0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trim23Q8BGX0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim23Q8BGX0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms