Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smndc1Q8BGT7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Gm11421-201ENSMUST00000122124 294 ntBASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smndc1Q8BGT7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smndc1Q8BGT7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smndc1Q8BGT7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smndc1Q8BGT7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smndc1Q8BGT7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms