Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Flg-201ENSMUST00000050758 1488 ntBASIC17.67■□□□□ 0.42
Ubp1Q811S7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.67■□□□□ 0.42
Ubp1Q811S7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.67■□□□□ 0.42
Ubp1Q811S7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Dio3-201ENSMUST00000097228 1449 ntBASIC17.66■□□□□ 0.42
Ubp1Q811S7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.66■□□□□ 0.42
Ubp1Q811S7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ubp1Q811S7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.66■□□□□ 0.42
Ubp1Q811S7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.65■□□□□ 0.42
Ubp1Q811S7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
Ubp1Q811S7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.65■□□□□ 0.42
Ubp1Q811S7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ubp1Q811S7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ubp1Q811S7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.64■□□□□ 0.41
Ubp1Q811S7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.64■□□□□ 0.41
Ubp1Q811S7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubp1Q811S7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.63■□□□□ 0.41
Ubp1Q811S7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.63■□□□□ 0.41
Ubp1Q811S7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubp1Q811S7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.63■□□□□ 0.41
Ubp1Q811S7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.62■□□□□ 0.41
Ubp1Q811S7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubp1Q811S7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.62■□□□□ 0.41
Ubp1Q811S7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.62■□□□□ 0.41
Ubp1Q811S7 Mtag2-201ENSMUST00000058665 714 ntBASIC17.62■□□□□ 0.41
Ubp1Q811S7 Zfp783-201ENSMUST00000095946 670 ntBASIC17.62■□□□□ 0.41
Ubp1Q811S7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubp1Q811S7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.61■□□□□ 0.41
Ubp1Q811S7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.61■□□□□ 0.41
Ubp1Q811S7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.61■□□□□ 0.41
Ubp1Q811S7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms