Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc116Q80X53 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Gm37179-201ENSMUST00000194862 823 ntBASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc116Q80X53 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc116Q80X53 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc116Q80X53 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc116Q80X53 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc116Q80X53 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Gm44549-201ENSMUST00000208351 577 ntBASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc116Q80X53 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms