Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp38Q80UU2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp38Q80UU2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp38Q80UU2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Rpp38Q80UU2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rpp38Q80UU2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Gm27275-201ENSMUST00000184318 272 ntBASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.89■□□□□ 0.45
Rpp38Q80UU2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp38Q80UU2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.88■□□□□ 0.45
Rpp38Q80UU2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp38Q80UU2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Gm15375-201ENSMUST00000119510 849 ntBASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp38Q80UU2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms