Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sned1Q70E20 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Sned1Q70E20 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.85■■□□□ 1.09
Sned1Q70E20 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.85■■□□□ 1.09
Sned1Q70E20 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sned1Q70E20 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.84■■□□□ 1.09
Sned1Q70E20 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sned1Q70E20 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.84■■□□□ 1.09
Sned1Q70E20 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sned1Q70E20 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sned1Q70E20 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sned1Q70E20 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sned1Q70E20 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sned1Q70E20 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sned1Q70E20 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sned1Q70E20 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sned1Q70E20 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.82■■□□□ 1.08
Sned1Q70E20 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.82■■□□□ 1.08
Sned1Q70E20 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Sned1Q70E20 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sned1Q70E20 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.82■■□□□ 1.08
Sned1Q70E20 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sned1Q70E20 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.81■■□□□ 1.08
Sned1Q70E20 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
Sned1Q70E20 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.81■■□□□ 1.08
Sned1Q70E20 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sned1Q70E20 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.81■■□□□ 1.08
Sned1Q70E20 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sned1Q70E20 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sned1Q70E20 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sned1Q70E20 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Sned1Q70E20 Mir770-201ENSMUST00000103252 94 ntBASIC21.8■■□□□ 1.08
Sned1Q70E20 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Sned1Q70E20 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Sned1Q70E20 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Sned1Q70E20 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 Birc2-201ENSMUST00000054878 378 ntBASIC21.8■■□□□ 1.08
Sned1Q70E20 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.8■■□□□ 1.08
Sned1Q70E20 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sned1Q70E20 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.8■■□□□ 1.08
Sned1Q70E20 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 Gm26039-201ENSMUST00000158152 144 ntBASIC21.8■■□□□ 1.08
Sned1Q70E20 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Sned1Q70E20 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sned1Q70E20 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Sned1Q70E20 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sned1Q70E20 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.79■■□□□ 1.08
Sned1Q70E20 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sned1Q70E20 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sned1Q70E20 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sned1Q70E20 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sned1Q70E20 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sned1Q70E20 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sned1Q70E20 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sned1Q70E20 Gm13884-201ENSMUST00000118103 829 ntBASIC21.78■■□□□ 1.08
Sned1Q70E20 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sned1Q70E20 Gm37722-201ENSMUST00000193757 208 ntBASIC21.78■■□□□ 1.08
Sned1Q70E20 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.78■■□□□ 1.08
Sned1Q70E20 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sned1Q70E20 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Sned1Q70E20 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.77■■□□□ 1.08
Sned1Q70E20 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Sned1Q70E20 Olfr129-201ENSMUST00000122318 993 ntBASIC21.77■■□□□ 1.08
Sned1Q70E20 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Sned1Q70E20 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sned1Q70E20 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Sned1Q70E20 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Sned1Q70E20 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Sned1Q70E20 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sned1Q70E20 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sned1Q70E20 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sned1Q70E20 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sned1Q70E20 Gm6623-201ENSMUST00000173570 544 ntBASIC21.76■■□□□ 1.07
Sned1Q70E20 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.76■■□□□ 1.07
Sned1Q70E20 Gm28659-201ENSMUST00000188013 759 ntBASIC21.76■■□□□ 1.07
Sned1Q70E20 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sned1Q70E20 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms