Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn10aQ6QIY3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn10aQ6QIY3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Gm18958-201ENSMUST00000174258 762 ntBASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Gm11950-201ENSMUST00000121615 838 ntBASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Gm7213-201ENSMUST00000215977 950 ntBASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn10aQ6QIY3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Scn10aQ6QIY3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Tgds-204ENSMUST00000228543 1594 ntBASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Scn10aQ6QIY3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Gm29791-202ENSMUST00000207888 369 ntBASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn10aQ6QIY3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn10aQ6QIY3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scn10aQ6QIY3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Gm10566-201ENSMUST00000086739 996 ntBASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn10aQ6QIY3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn10aQ6QIY3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Scn10aQ6QIY3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.39■□□□□ 0.85
Scn10aQ6QIY3 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms