Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Dhx40Q6PE54 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Dhx40Q6PE54 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Dhx40Q6PE54 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.95■□□□□ 0.78
Dhx40Q6PE54 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Dhx40Q6PE54 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.93■□□□□ 0.78
Dhx40Q6PE54 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.92■□□□□ 0.78
Dhx40Q6PE54 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dhx40Q6PE54 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Gm13234-201ENSMUST00000120010 747 ntBASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.9■□□□□ 0.78
Dhx40Q6PE54 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Dhx40Q6PE54 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Dhx40Q6PE54 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Dhx40Q6PE54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Dhx40Q6PE54 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dhx40Q6PE54 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Dhx40Q6PE54 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Dhx40Q6PE54 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dhx40Q6PE54 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms