Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herc4Q6PAV2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Herc4Q6PAV2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Flg-201ENSMUST00000050758 1488 ntBASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herc4Q6PAV2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herc4Q6PAV2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Gm38285-201ENSMUST00000192928 922 ntBASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herc4Q6PAV2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Gm2559-201ENSMUST00000201323 363 ntBASIC19.8■□□□□ 0.76
Herc4Q6PAV2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herc4Q6PAV2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herc4Q6PAV2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herc4Q6PAV2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms