Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AtmQ62388 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
AtmQ62388 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
AtmQ62388 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.02■□□□□ 0.31
AtmQ62388 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AtmQ62388 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
AtmQ62388 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.01■□□□□ 0.31
AtmQ62388 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AtmQ62388 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.01■□□□□ 0.31
AtmQ62388 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AtmQ62388 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
AtmQ62388 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.01■□□□□ 0.31
AtmQ62388 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AtmQ62388 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AtmQ62388 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17■□□□□ 0.31
AtmQ62388 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
AtmQ62388 Gm5864-201ENSMUST00000202263 970 ntBASIC17■□□□□ 0.31
AtmQ62388 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17■□□□□ 0.31
AtmQ62388 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17■□□□□ 0.31
AtmQ62388 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17■□□□□ 0.31
AtmQ62388 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Gm18688-201ENSMUST00000204695 1859 ntBASIC17■□□□□ 0.31
AtmQ62388 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17■□□□□ 0.31
AtmQ62388 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17■□□□□ 0.31
AtmQ62388 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AtmQ62388 Grk6-206ENSMUST00000224995 2971 ntBASIC17■□□□□ 0.31
AtmQ62388 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
AtmQ62388 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
AtmQ62388 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.99■□□□□ 0.31
AtmQ62388 Gm18733-201ENSMUST00000173950 856 ntBASIC16.99■□□□□ 0.31
AtmQ62388 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.99■□□□□ 0.31
AtmQ62388 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
AtmQ62388 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AtmQ62388 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Gm16061-201ENSMUST00000122167 857 ntBASIC16.98■□□□□ 0.31
AtmQ62388 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.98■□□□□ 0.31
AtmQ62388 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
AtmQ62388 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AtmQ62388 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
AtmQ62388 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Gm27742-201ENSMUST00000184667 60 ntBASIC16.97■□□□□ 0.31
AtmQ62388 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.97■□□□□ 0.31
AtmQ62388 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.97■□□□□ 0.31
AtmQ62388 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Gm17808-201ENSMUST00000200859 894 ntBASIC16.97■□□□□ 0.31
AtmQ62388 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Gm7370-201ENSMUST00000219471 767 ntBASIC16.97■□□□□ 0.31
AtmQ62388 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.97■□□□□ 0.31
AtmQ62388 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AtmQ62388 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms