Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.43■□□□□ 0.54
Six1Q62231 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six1Q62231 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.42■□□□□ 0.54
Six1Q62231 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Six1Q62231 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Six1Q62231 AV356131-201ENSMUST00000206201 750 ntBASIC18.42■□□□□ 0.54
Six1Q62231 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Six1Q62231 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Six1Q62231 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.41■□□□□ 0.54
Six1Q62231 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.41■□□□□ 0.54
Six1Q62231 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.41■□□□□ 0.54
Six1Q62231 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.41■□□□□ 0.54
Six1Q62231 Gm18671-201ENSMUST00000214826 683 ntBASIC18.41■□□□□ 0.54
Six1Q62231 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.41■□□□□ 0.54
Six1Q62231 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Six1Q62231 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Six1Q62231 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Six1Q62231 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Six1Q62231 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Six1Q62231 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Six1Q62231 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.39■□□□□ 0.53
Six1Q62231 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.39■□□□□ 0.53
Six1Q62231 Gm7291-201ENSMUST00000199147 382 ntBASIC18.39■□□□□ 0.53
Six1Q62231 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.39■□□□□ 0.53
Six1Q62231 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Six1Q62231 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Six1Q62231 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.38■□□□□ 0.53
Six1Q62231 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Gm10849-201ENSMUST00000100397 618 ntBASIC18.38■□□□□ 0.53
Six1Q62231 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.38■□□□□ 0.53
Six1Q62231 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Six1Q62231 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Six1Q62231 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Six1Q62231 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Six1Q62231 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Six1Q62231 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Six1Q62231 Gm5874-201ENSMUST00000096101 508 ntBASIC18.37■□□□□ 0.53
Six1Q62231 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Six1Q62231 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms