Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.12■□□□□ 0.97
Ctr9Q62018 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ctr9Q62018 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ctr9Q62018 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.11■□□□□ 0.97
Ctr9Q62018 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctr9Q62018 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ctr9Q62018 Tgds-204ENSMUST00000228543 1594 ntBASIC21.11■□□□□ 0.97
Ctr9Q62018 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctr9Q62018 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.11■□□□□ 0.97
Ctr9Q62018 Mir2861-201ENSMUST00000175539 82 ntBASIC21.11■□□□□ 0.97
Ctr9Q62018 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ctr9Q62018 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctr9Q62018 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.11■□□□□ 0.97
Ctr9Q62018 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctr9Q62018 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ctr9Q62018 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ctr9Q62018 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Ctr9Q62018 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Gm37292-201ENSMUST00000192062 758 ntBASIC21.1■□□□□ 0.97
Ctr9Q62018 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.1■□□□□ 0.97
Ctr9Q62018 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctr9Q62018 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ctr9Q62018 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ctr9Q62018 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ctr9Q62018 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.09■□□□□ 0.97
Ctr9Q62018 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.09■□□□□ 0.97
Ctr9Q62018 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ctr9Q62018 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ctr9Q62018 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ctr9Q62018 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ctr9Q62018 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ctr9Q62018 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ctr9Q62018 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.08■□□□□ 0.97
Ctr9Q62018 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ctr9Q62018 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ctr9Q62018 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.08■□□□□ 0.97
Ctr9Q62018 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.08■□□□□ 0.97
Ctr9Q62018 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ctr9Q62018 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.08■□□□□ 0.97
Ctr9Q62018 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Ctr9Q62018 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ctr9Q62018 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ctr9Q62018 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ctr9Q62018 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ctr9Q62018 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.07■□□□□ 0.96
Ctr9Q62018 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Gm715-201ENSMUST00000117865 831 ntBASIC21.07■□□□□ 0.96
Ctr9Q62018 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ctr9Q62018 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.07■□□□□ 0.96
Ctr9Q62018 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ctr9Q62018 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ctr9Q62018 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ctr9Q62018 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ctr9Q62018 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ctr9Q62018 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.06■□□□□ 0.96
Ctr9Q62018 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Ctr9Q62018 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctr9Q62018 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ctr9Q62018 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.05■□□□□ 0.96
Ctr9Q62018 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctr9Q62018 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.04■□□□□ 0.96
Ctr9Q62018 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ctr9Q62018 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ctr9Q62018 Mir6982-201ENSMUST00000184354 68 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms