Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ecm1Q61508 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ecm1Q61508 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.94■□□□□ 0.78
Ecm1Q61508 Gm33142-201ENSMUST00000193913 867 ntBASIC19.94■□□□□ 0.78
Ecm1Q61508 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.94■□□□□ 0.78
Ecm1Q61508 Gm18101-201ENSMUST00000215769 548 ntBASIC19.94■□□□□ 0.78
Ecm1Q61508 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ecm1Q61508 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ecm1Q61508 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ecm1Q61508 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.94■□□□□ 0.78
Ecm1Q61508 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ecm1Q61508 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.93■□□□□ 0.78
Ecm1Q61508 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.93■□□□□ 0.78
Ecm1Q61508 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.93■□□□□ 0.78
Ecm1Q61508 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ecm1Q61508 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ecm1Q61508 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.92■□□□□ 0.78
Ecm1Q61508 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.92■□□□□ 0.78
Ecm1Q61508 Gm22697-201ENSMUST00000175194 63 ntBASIC19.92■□□□□ 0.78
Ecm1Q61508 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ecm1Q61508 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.91■□□□□ 0.78
Ecm1Q61508 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.91■□□□□ 0.78
Ecm1Q61508 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ecm1Q61508 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.91■□□□□ 0.78
Ecm1Q61508 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.91■□□□□ 0.78
Ecm1Q61508 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.91■□□□□ 0.78
Ecm1Q61508 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.91■□□□□ 0.78
Ecm1Q61508 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ecm1Q61508 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.91■□□□□ 0.78
Ecm1Q61508 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ecm1Q61508 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.9■□□□□ 0.78
Ecm1Q61508 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Ecm1Q61508 Gm10418-201ENSMUST00000100943 576 ntBASIC19.9■□□□□ 0.78
Ecm1Q61508 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ecm1Q61508 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ecm1Q61508 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ecm1Q61508 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.9■□□□□ 0.78
Ecm1Q61508 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ecm1Q61508 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ecm1Q61508 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ecm1Q61508 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Gm13401-201ENSMUST00000117074 291 ntBASIC19.89■□□□□ 0.77
Ecm1Q61508 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Gm16061-201ENSMUST00000122167 857 ntBASIC19.89■□□□□ 0.77
Ecm1Q61508 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.89■□□□□ 0.77
Ecm1Q61508 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ecm1Q61508 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ecm1Q61508 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ecm1Q61508 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ecm1Q61508 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ecm1Q61508 Gm7638-201ENSMUST00000121348 967 ntBASIC19.88■□□□□ 0.77
Ecm1Q61508 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms