Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.5■□□□□ 0.39
Vsx2Q61412 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.5■□□□□ 0.39
Vsx2Q61412 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vsx2Q61412 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.5■□□□□ 0.39
Vsx2Q61412 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.5■□□□□ 0.39
Vsx2Q61412 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vsx2Q61412 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
Vsx2Q61412 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vsx2Q61412 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.49■□□□□ 0.39
Vsx2Q61412 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vsx2Q61412 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vsx2Q61412 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx2Q61412 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vsx2Q61412 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.48■□□□□ 0.39
Vsx2Q61412 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.48■□□□□ 0.39
Vsx2Q61412 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx2Q61412 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.47■□□□□ 0.39
Vsx2Q61412 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vsx2Q61412 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx2Q61412 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx2Q61412 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vsx2Q61412 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vsx2Q61412 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.46■□□□□ 0.38
Vsx2Q61412 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.46■□□□□ 0.38
Vsx2Q61412 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Vsx2Q61412 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.45■□□□□ 0.38
Vsx2Q61412 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.45■□□□□ 0.38
Vsx2Q61412 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.45■□□□□ 0.38
Vsx2Q61412 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx2Q61412 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.44■□□□□ 0.38
Vsx2Q61412 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Gm27011-201ENSMUST00000182352 972 ntBASIC17.44■□□□□ 0.38
Vsx2Q61412 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.44■□□□□ 0.38
Vsx2Q61412 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Vsx2Q61412 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx2Q61412 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.44■□□□□ 0.38
Vsx2Q61412 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms