Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC26.06■■□□□ 1.76
Ptch1Q61115 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm43006-201ENSMUST00000197702 1602 ntBASIC26.06■■□□□ 1.76
Ptch1Q61115 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ptch1Q61115 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC26.05■■□□□ 1.76
Ptch1Q61115 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.05■■□□□ 1.76
Ptch1Q61115 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC26.05■■□□□ 1.76
Ptch1Q61115 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC26.05■■□□□ 1.76
Ptch1Q61115 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC26.05■■□□□ 1.76
Ptch1Q61115 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Ptch1Q61115 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Ptch1Q61115 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptch1Q61115 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptch1Q61115 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Ptch1Q61115 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC26.04■■□□□ 1.76
Ptch1Q61115 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC26.04■■□□□ 1.76
Ptch1Q61115 Gm9731-201ENSMUST00000209480 747 ntBASIC26.04■■□□□ 1.76
Ptch1Q61115 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC26.04■■□□□ 1.76
Ptch1Q61115 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ptch1Q61115 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC26.03■■□□□ 1.76
Ptch1Q61115 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
Ptch1Q61115 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC26.03■■□□□ 1.76
Ptch1Q61115 Il3ra-202ENSMUST00000223589 738 ntBASIC26.03■■□□□ 1.76
Ptch1Q61115 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Ptch1Q61115 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC26.02■■□□□ 1.76
Ptch1Q61115 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ptch1Q61115 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Ptch1Q61115 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC26.02■■□□□ 1.76
Ptch1Q61115 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ptch1Q61115 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ptch1Q61115 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Ptch1Q61115 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC26.02■■□□□ 1.76
Ptch1Q61115 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ptch1Q61115 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Ptch1Q61115 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Ptch1Q61115 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
Ptch1Q61115 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ptch1Q61115 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ptch1Q61115 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Ptch1Q61115 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Ptch1Q61115 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC26■■□□□ 1.75
Ptch1Q61115 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC26■■□□□ 1.75
Ptch1Q61115 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC26■■□□□ 1.75
Ptch1Q61115 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC26■■□□□ 1.75
Ptch1Q61115 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Ptch1Q61115 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC25.99■■□□□ 1.75
Ptch1Q61115 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ptch1Q61115 Rncr4-201ENSMUST00000194541 2234 ntBASIC25.99■■□□□ 1.75
Ptch1Q61115 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ptch1Q61115 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Ptch1Q61115 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ptch1Q61115 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ptch1Q61115 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
Ptch1Q61115 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC25.98■■□□□ 1.75
Ptch1Q61115 Gm6443-201ENSMUST00000203599 874 ntBASIC25.98■■□□□ 1.75
Ptch1Q61115 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC25.98■■□□□ 1.75
Ptch1Q61115 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Ptch1Q61115 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Ptch1Q61115 Mir770-201ENSMUST00000103252 94 ntBASIC25.97■■□□□ 1.75
Ptch1Q61115 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Ptch1Q61115 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC25.97■■□□□ 1.75
Ptch1Q61115 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
Ptch1Q61115 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ptch1Q61115 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ptch1Q61115 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ptch1Q61115 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
Ptch1Q61115 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms