Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.69□□□□□ -0.7
Abca13Q5SSE9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Abca13Q5SSE9 Gm14822-201ENSMUST00000122247 291 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm11452-201ENSMUST00000122376 690 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Mir1668-201ENSMUST00000184114 107 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm27000-201ENSMUST00000182943 842 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Gm5364-201ENSMUST00000216789 889 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Abca13Q5SSE9 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Gm8309-201ENSMUST00000206627 1448 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Gm7213-201ENSMUST00000215977 950 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Gm11779-201ENSMUST00000118541 368 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Dmtn-209ENSMUST00000228295 2572 ntBASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Abca13Q5SSE9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Mir2861-201ENSMUST00000175539 82 ntBASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Gm27389-201ENSMUST00000183622 195 ntBASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Olfr129-201ENSMUST00000122318 993 ntBASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Abca13Q5SSE9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Abca13Q5SSE9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Abca13Q5SSE9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms