Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col27a1Q5QNQ9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col27a1Q5QNQ9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col27a1Q5QNQ9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Olfr129-201ENSMUST00000122318 993 ntBASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col27a1Q5QNQ9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col27a1Q5QNQ9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Gm27525-201ENSMUST00000184465 107 ntBASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col27a1Q5QNQ9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Golph3-202ENSMUST00000226517 2359 ntBASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.4■□□□□ 0.38
Col27a1Q5QNQ9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Actl10-202ENSMUST00000226583 1501 ntBASIC17.39■□□□□ 0.37
Col27a1Q5QNQ9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms