Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Gm18959-201ENSMUST00000208954 655 ntBASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf43Q5NCP0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Mir2861-201ENSMUST00000175539 82 ntBASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Gm18032-201ENSMUST00000222541 538 ntBASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf43Q5NCP0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf43Q5NCP0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Gm23634-201ENSMUST00000175071 91 ntBASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Gm45058-201ENSMUST00000205810 766 ntBASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf43Q5NCP0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Gm10013-201ENSMUST00000106074 672 ntBASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf43Q5NCP0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf43Q5NCP0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf43Q5NCP0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf43Q5NCP0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Rnf43Q5NCP0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf43Q5NCP0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf43Q5NCP0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf43Q5NCP0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms