Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps41Q5KU39 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps41Q5KU39 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps41Q5KU39 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.74■□□□□ 0.59
Vps41Q5KU39 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps41Q5KU39 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.74■□□□□ 0.59
Vps41Q5KU39 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps41Q5KU39 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.73■□□□□ 0.59
Vps41Q5KU39 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps41Q5KU39 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.72■□□□□ 0.59
Vps41Q5KU39 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps41Q5KU39 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps41Q5KU39 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Vps41Q5KU39 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.7■□□□□ 0.58
Vps41Q5KU39 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps41Q5KU39 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps41Q5KU39 Tgds-204ENSMUST00000228543 1594 ntBASIC18.68■□□□□ 0.58
Vps41Q5KU39 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps41Q5KU39 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms