Protein–RNA interactions for Protein: Q5BKP2

Usp13, Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13Q5BKP2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp13Q5BKP2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp13Q5BKP2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp13Q5BKP2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.17■□□□□ 0.82
Usp13Q5BKP2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp13Q5BKP2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp13Q5BKP2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Gm22325-201ENSMUST00000158904 308 ntBASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp13Q5BKP2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp13Q5BKP2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Usp13Q5BKP2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Usp13Q5BKP2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp13Q5BKP2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Mir6982-201ENSMUST00000184354 68 ntBASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp13Q5BKP2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp13Q5BKP2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms