Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Gm2274-201ENSMUST00000184539 609 ntBASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Gm14859-201ENSMUST00000117752 357 ntBASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Arhgef40Q3UPH7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Arhgef40Q3UPH7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC26.53■■□□□ 1.84
Arhgef40Q3UPH7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Gm7638-201ENSMUST00000121348 967 ntBASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Arhgef40Q3UPH7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
Arhgef40Q3UPH7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Gm16061-201ENSMUST00000122167 857 ntBASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Arhgef40Q3UPH7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Gm22697-201ENSMUST00000175194 63 ntBASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC26.49■■□□□ 1.83
Arhgef40Q3UPH7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Gm29791-202ENSMUST00000207888 369 ntBASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Arhgef40Q3UPH7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Gm7284-201ENSMUST00000131667 944 ntBASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC26.47■■□□□ 1.83
Arhgef40Q3UPH7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms