Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13□□□□□ -0.33
Cks1brtQ3UNC9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Gm43294-201ENSMUST00000202850 2490 ntBASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cks1brtQ3UNC9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cks1brtQ3UNC9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Gm14523-201ENSMUST00000117260 558 ntBASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Gm7332-201ENSMUST00000118351 454 ntBASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cks1brtQ3UNC9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cks1brtQ3UNC9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Gm10399-202ENSMUST00000202768 748 ntBASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cks1brtQ3UNC9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms