Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Gm6659-201ENSMUST00000174752 547 ntBASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Carmil3Q3UFQ8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Carmil3Q3UFQ8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Carmil3Q3UFQ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.64■■□□□ 1.06
Carmil3Q3UFQ8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Carmil3Q3UFQ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Carmil3Q3UFQ8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 Gm18959-201ENSMUST00000208954 655 ntBASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Carmil3Q3UFQ8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Carmil3Q3UFQ8 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Carmil3Q3UFQ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Carmil3Q3UFQ8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms