Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Gm25016-201ENSMUST00000158399 131 ntBASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Gm7461-201ENSMUST00000058918 827 ntBASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim7Q3TJD7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim7Q3TJD7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim7Q3TJD7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim7Q3TJD7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim7Q3TJD7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdlim7Q3TJD7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Pdlim7Q3TJD7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim7Q3TJD7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim7Q3TJD7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim7Q3TJD7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim7Q3TJD7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim7Q3TJD7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms