Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
PrkdcP97313 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PrkdcP97313 Gm18195-201ENSMUST00000207604 706 ntBASIC12.37□□□□□ -0.43
PrkdcP97313 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PrkdcP97313 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PrkdcP97313 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
PrkdcP97313 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.37□□□□□ -0.43
PrkdcP97313 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Gm11452-201ENSMUST00000122376 690 ntBASIC12.37□□□□□ -0.43
PrkdcP97313 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.37□□□□□ -0.43
PrkdcP97313 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PrkdcP97313 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
PrkdcP97313 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrkdcP97313 Gm10418-201ENSMUST00000100943 576 ntBASIC12.36□□□□□ -0.43
PrkdcP97313 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.36□□□□□ -0.43
PrkdcP97313 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.36□□□□□ -0.43
PrkdcP97313 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.36□□□□□ -0.43
PrkdcP97313 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.36□□□□□ -0.43
PrkdcP97313 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrkdcP97313 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.35□□□□□ -0.43
PrkdcP97313 Mir770-201ENSMUST00000103252 94 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 Gm43438-201ENSMUST00000198133 379 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
PrkdcP97313 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PrkdcP97313 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.35□□□□□ -0.43
PrkdcP97313 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Gm23935-201ENSMUST00000102303 57 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 Gm24270-201ENSMUST00000102326 57 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Gm24245-201ENSMUST00000157318 57 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Gm45328-201ENSMUST00000210942 917 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
PrkdcP97313 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
PrkdcP97313 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PrkdcP97313 Gm26039-201ENSMUST00000158152 144 ntBASIC12.34□□□□□ -0.43
PrkdcP97313 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.34□□□□□ -0.43
PrkdcP97313 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PrkdcP97313 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
PrkdcP97313 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.33□□□□□ -0.44
PrkdcP97313 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
PrkdcP97313 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Il3ra-202ENSMUST00000223589 738 ntBASIC12.33□□□□□ -0.44
PrkdcP97313 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PrkdcP97313 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PrkdcP97313 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.33□□□□□ -0.44
PrkdcP97313 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PrkdcP97313 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PrkdcP97313 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms