Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shox2P70390 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shox2P70390 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Shox2P70390 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.75■□□□□ 0.43
Shox2P70390 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.75■□□□□ 0.43
Shox2P70390 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.75■□□□□ 0.43
Shox2P70390 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shox2P70390 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Shox2P70390 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shox2P70390 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shox2P70390 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shox2P70390 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.74■□□□□ 0.43
Shox2P70390 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Shox2P70390 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shox2P70390 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.73■□□□□ 0.43
Shox2P70390 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.73■□□□□ 0.43
Shox2P70390 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shox2P70390 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.73■□□□□ 0.43
Shox2P70390 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.73■□□□□ 0.43
Shox2P70390 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.73■□□□□ 0.43
Shox2P70390 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shox2P70390 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.72■□□□□ 0.43
Shox2P70390 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shox2P70390 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
Shox2P70390 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shox2P70390 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shox2P70390 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Shox2P70390 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.71■□□□□ 0.43
Shox2P70390 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.71■□□□□ 0.43
Shox2P70390 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.71■□□□□ 0.43
Shox2P70390 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shox2P70390 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.71■□□□□ 0.42
Shox2P70390 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shox2P70390 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Shox2P70390 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shox2P70390 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shox2P70390 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.7■□□□□ 0.42
Shox2P70390 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.7■□□□□ 0.42
Shox2P70390 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shox2P70390 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.7■□□□□ 0.42
Shox2P70390 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms