Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ybx1P62960 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ybx1P62960 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ybx1P62960 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ybx1P62960 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ybx1P62960 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Ybx1P62960 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.42■□□□□ 0.54
Ybx1P62960 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ybx1P62960 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ybx1P62960 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.41■□□□□ 0.54
Ybx1P62960 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Ybx1P62960 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ybx1P62960 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ybx1P62960 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ybx1P62960 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ybx1P62960 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.4■□□□□ 0.54
Ybx1P62960 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ybx1P62960 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.4■□□□□ 0.54
Ybx1P62960 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ybx1P62960 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ybx1P62960 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ybx1P62960 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ybx1P62960 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ybx1P62960 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.39■□□□□ 0.53
Ybx1P62960 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Ybx1P62960 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.39■□□□□ 0.53
Ybx1P62960 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Gm6659-201ENSMUST00000174752 547 ntBASIC18.39■□□□□ 0.53
Ybx1P62960 Mir2861-201ENSMUST00000175539 82 ntBASIC18.39■□□□□ 0.53
Ybx1P62960 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.39■□□□□ 0.53
Ybx1P62960 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ybx1P62960 Gm10819-201ENSMUST00000099988 561 ntBASIC18.39■□□□□ 0.53
Ybx1P62960 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ybx1P62960 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.38■□□□□ 0.53
Ybx1P62960 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.38■□□□□ 0.53
Ybx1P62960 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ybx1P62960 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ybx1P62960 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Ybx1P62960 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.37■□□□□ 0.53
Ybx1P62960 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.37■□□□□ 0.53
Ybx1P62960 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.37■□□□□ 0.53
Ybx1P62960 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.37■□□□□ 0.53
Ybx1P62960 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.37■□□□□ 0.53
Ybx1P62960 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.37■□□□□ 0.53
Ybx1P62960 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ybx1P62960 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ybx1P62960 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ybx1P62960 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ybx1P62960 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ybx1P62960 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ybx1P62960 Gm12085-201ENSMUST00000119263 940 ntBASIC18.36■□□□□ 0.53
Ybx1P62960 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms