Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccr1P51675 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccr1P51675 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.53■□□□□ 0.72
Ccr1P51675 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr1P51675 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccr1P51675 Gm11643-201ENSMUST00000119578 864 ntBASIC19.52■□□□□ 0.72
Ccr1P51675 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ccr1P51675 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccr1P51675 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccr1P51675 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccr1P51675 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccr1P51675 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ccr1P51675 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Gm43799-201ENSMUST00000201845 579 ntBASIC19.51■□□□□ 0.71
Ccr1P51675 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccr1P51675 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.51■□□□□ 0.71
Ccr1P51675 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccr1P51675 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.51■□□□□ 0.71
Ccr1P51675 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccr1P51675 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr1P51675 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.5■□□□□ 0.71
Ccr1P51675 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr1P51675 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.5■□□□□ 0.71
Ccr1P51675 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr1P51675 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr1P51675 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr1P51675 Gm3375-201ENSMUST00000203929 796 ntBASIC19.5■□□□□ 0.71
Ccr1P51675 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccr1P51675 Gm30025-201ENSMUST00000218555 728 ntBASIC19.5■□□□□ 0.71
Ccr1P51675 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr1P51675 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccr1P51675 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccr1P51675 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Gm7977-201ENSMUST00000193787 748 ntBASIC19.49■□□□□ 0.71
Ccr1P51675 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Gm9987-201ENSMUST00000069768 567 ntBASIC19.49■□□□□ 0.71
Ccr1P51675 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr1P51675 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ccr1P51675 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ccr1P51675 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr1P51675 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccr1P51675 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccr1P51675 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr1P51675 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr1P51675 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr1P51675 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr1P51675 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccr1P51675 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Gm10517-202ENSMUST00000192970 758 ntBASIC19.47■□□□□ 0.71
Ccr1P51675 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr1P51675 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ccr1P51675 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccr1P51675 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr1P51675 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr1P51675 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr1P51675 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr1P51675 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms