Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rpl13P47963 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.65■□□□□ 0.74
Rpl13P47963 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl13P47963 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rpl13P47963 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Rpl13P47963 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rpl13P47963 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.64■□□□□ 0.73
Rpl13P47963 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl13P47963 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rpl13P47963 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl13P47963 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rpl13P47963 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.64■□□□□ 0.73
Rpl13P47963 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.64■□□□□ 0.73
Rpl13P47963 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rpl13P47963 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rpl13P47963 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl13P47963 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpl13P47963 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Rpl13P47963 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rpl13P47963 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.63■□□□□ 0.73
Rpl13P47963 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl13P47963 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl13P47963 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rpl13P47963 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rpl13P47963 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl13P47963 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.62■□□□□ 0.73
Rpl13P47963 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.62■□□□□ 0.73
Rpl13P47963 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.62■□□□□ 0.73
Rpl13P47963 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rpl13P47963 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Gm10602-201ENSMUST00000098239 609 ntBASIC19.62■□□□□ 0.73
Rpl13P47963 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpl13P47963 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpl13P47963 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13P47963 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rpl13P47963 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Rpl13P47963 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Rpl13P47963 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Gm5408-201ENSMUST00000197998 747 ntBASIC19.61■□□□□ 0.73
Rpl13P47963 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpl13P47963 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpl13P47963 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpl13P47963 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl13P47963 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpl13P47963 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.6■□□□□ 0.73
Rpl13P47963 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpl13P47963 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.6■□□□□ 0.73
Rpl13P47963 Flg-201ENSMUST00000050758 1488 ntBASIC19.6■□□□□ 0.73
Rpl13P47963 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13P47963 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rpl13P47963 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rpl13P47963 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rpl13P47963 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Gm38285-201ENSMUST00000192928 922 ntBASIC19.59■□□□□ 0.73
Rpl13P47963 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rpl13P47963 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.59■□□□□ 0.73
Rpl13P47963 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl13P47963 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl13P47963 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.58■□□□□ 0.73
Rpl13P47963 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms