Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cd9P40240 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.71■□□□□ 0.43
Cd9P40240 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd9P40240 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.71■□□□□ 0.42
Cd9P40240 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cd9P40240 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cd9P40240 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cd9P40240 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.7■□□□□ 0.42
Cd9P40240 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.7■□□□□ 0.42
Cd9P40240 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.7■□□□□ 0.42
Cd9P40240 Gm10138-203ENSMUST00000206952 366 ntBASIC17.7■□□□□ 0.42
Cd9P40240 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.7■□□□□ 0.42
Cd9P40240 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.7■□□□□ 0.42
Cd9P40240 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.7■□□□□ 0.42
Cd9P40240 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cd9P40240 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd9P40240 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cd9P40240 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd9P40240 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd9P40240 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd9P40240 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd9P40240 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd9P40240 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
Cd9P40240 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd9P40240 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Gm11643-201ENSMUST00000119578 864 ntBASIC17.68■□□□□ 0.42
Cd9P40240 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Mir8112-201ENSMUST00000184382 131 ntBASIC17.68■□□□□ 0.42
Cd9P40240 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.68■□□□□ 0.42
Cd9P40240 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cd9P40240 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd9P40240 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cd9P40240 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Cd9P40240 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.67■□□□□ 0.42
Cd9P40240 Mtag2-201ENSMUST00000058665 714 ntBASIC17.67■□□□□ 0.42
Cd9P40240 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cd9P40240 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd9P40240 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.67■□□□□ 0.42
Cd9P40240 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Cd9P40240 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cd9P40240 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms