Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.43■□□□□ 0.06
Slc6a1P31648 Gm43017-201ENSMUST00000198296 752 ntBASIC15.43■□□□□ 0.06
Slc6a1P31648 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.43■□□□□ 0.06
Slc6a1P31648 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.43■□□□□ 0.06
Slc6a1P31648 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Slc6a1P31648 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Slc6a1P31648 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Gm8495-201ENSMUST00000188740 694 ntBASIC15.42■□□□□ 0.06
Slc6a1P31648 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.42■□□□□ 0.06
Slc6a1P31648 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Gm43173-201ENSMUST00000202246 593 ntBASIC15.42■□□□□ 0.06
Slc6a1P31648 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Slc6a1P31648 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Slc6a1P31648 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a1P31648 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc6a1P31648 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.41■□□□□ 0.06
Slc6a1P31648 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Slc6a1P31648 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc6a1P31648 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.41■□□□□ 0.06
Slc6a1P31648 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.4■□□□□ 0.06
Slc6a1P31648 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.4■□□□□ 0.06
Slc6a1P31648 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Gm18284-201ENSMUST00000172604 624 ntBASIC15.4■□□□□ 0.06
Slc6a1P31648 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.4■□□□□ 0.06
Slc6a1P31648 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a1P31648 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Slc6a1P31648 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Slc6a1P31648 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a1P31648 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a1P31648 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a1P31648 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a1P31648 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a1P31648 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms