Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd40P27512 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd40P27512 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd40P27512 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Gm12527-201ENSMUST00000117967 564 ntBASIC16.24■□□□□ 0.19
Cd40P27512 Gm27275-201ENSMUST00000184318 272 ntBASIC16.24■□□□□ 0.19
Cd40P27512 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cd40P27512 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cd40P27512 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd40P27512 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Cd40P27512 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd40P27512 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd40P27512 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.23■□□□□ 0.19
Cd40P27512 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cd40P27512 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.23■□□□□ 0.19
Cd40P27512 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd40P27512 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cd40P27512 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cd40P27512 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cd40P27512 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.22■□□□□ 0.19
Cd40P27512 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd40P27512 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cd40P27512 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.22■□□□□ 0.19
Cd40P27512 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.22■□□□□ 0.19
Cd40P27512 Gm37856-201ENSMUST00000191634 999 ntBASIC16.22■□□□□ 0.19
Cd40P27512 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.22■□□□□ 0.19
Cd40P27512 Gm10138-203ENSMUST00000206952 366 ntBASIC16.22■□□□□ 0.19
Cd40P27512 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Mtag2-201ENSMUST00000058665 714 ntBASIC16.22■□□□□ 0.19
Cd40P27512 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cd40P27512 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.21■□□□□ 0.19
Cd40P27512 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.21■□□□□ 0.19
Cd40P27512 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cd40P27512 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Grk6-206ENSMUST00000224995 2971 ntBASIC16.21■□□□□ 0.19
Cd40P27512 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cd40P27512 Gm13158-201ENSMUST00000122007 736 ntBASIC16.21■□□□□ 0.19
Cd40P27512 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.21■□□□□ 0.19
Cd40P27512 Trmt13-210ENSMUST00000198454 880 ntBASIC16.21■□□□□ 0.19
Cd40P27512 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Cd40P27512 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cd40P27512 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cd40P27512 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd40P27512 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cd40P27512 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Cd40P27512 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cd40P27512 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.2■□□□□ 0.18
Cd40P27512 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cd40P27512 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cd40P27512 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cd40P27512 Mir6349-201ENSMUST00000184059 97 ntBASIC16.2■□□□□ 0.18
Cd40P27512 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.2■□□□□ 0.18
Cd40P27512 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cd40P27512 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cd40P27512 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.2■□□□□ 0.18
Cd40P27512 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cd40P27512 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cd40P27512 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cd40P27512 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms