Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd48P18181 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd48P18181 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cd48P18181 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.11■□□□□ 0.17
Cd48P18181 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.11■□□□□ 0.17
Cd48P18181 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd48P18181 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cd48P18181 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cd48P18181 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cd48P18181 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.11■□□□□ 0.17
Cd48P18181 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cd48P18181 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.1■□□□□ 0.17
Cd48P18181 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.1■□□□□ 0.17
Cd48P18181 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.1■□□□□ 0.17
Cd48P18181 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.1■□□□□ 0.17
Cd48P18181 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cd48P18181 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.1■□□□□ 0.17
Cd48P18181 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.1■□□□□ 0.17
Cd48P18181 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cd48P18181 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.09■□□□□ 0.17
Cd48P18181 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.09■□□□□ 0.17
Cd48P18181 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.09■□□□□ 0.17
Cd48P18181 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.09■□□□□ 0.17
Cd48P18181 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.09■□□□□ 0.17
Cd48P18181 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cd48P18181 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cd48P18181 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Cd48P18181 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Cd48P18181 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cd48P18181 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.08■□□□□ 0.16
Cd48P18181 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.08■□□□□ 0.16
Cd48P18181 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cd48P18181 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.08■□□□□ 0.16
Cd48P18181 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd48P18181 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd48P18181 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Cd48P18181 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cd48P18181 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Cd48P18181 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.07■□□□□ 0.16
Cd48P18181 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.07■□□□□ 0.16
Cd48P18181 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.07■□□□□ 0.16
Cd48P18181 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.07■□□□□ 0.16
Cd48P18181 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Cd48P18181 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cd48P18181 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cd48P18181 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd48P18181 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd48P18181 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd48P18181 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.06■□□□□ 0.16
Cd48P18181 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.06■□□□□ 0.16
Cd48P18181 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cd48P18181 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cd48P18181 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms