Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.77■□□□□ 0.76
Msh3P13705 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh3P13705 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msh3P13705 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh3P13705 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh3P13705 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh3P13705 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msh3P13705 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Msh3P13705 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.76■□□□□ 0.75
Msh3P13705 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh3P13705 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Msh3P13705 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh3P13705 Gm12527-201ENSMUST00000117967 564 ntBASIC19.76■□□□□ 0.75
Msh3P13705 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh3P13705 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh3P13705 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
Msh3P13705 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.75■□□□□ 0.75
Msh3P13705 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Msh3P13705 Mir6349-201ENSMUST00000184059 97 ntBASIC19.75■□□□□ 0.75
Msh3P13705 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh3P13705 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.74■□□□□ 0.75
Msh3P13705 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Msh3P13705 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
Msh3P13705 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Msh3P13705 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.74■□□□□ 0.75
Msh3P13705 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.74■□□□□ 0.75
Msh3P13705 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.74■□□□□ 0.75
Msh3P13705 Gm10138-203ENSMUST00000206952 366 ntBASIC19.74■□□□□ 0.75
Msh3P13705 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Msh3P13705 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msh3P13705 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Msh3P13705 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.73■□□□□ 0.75
Msh3P13705 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Msh3P13705 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.73■□□□□ 0.75
Msh3P13705 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.73■□□□□ 0.75
Msh3P13705 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Msh3P13705 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh3P13705 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Msh3P13705 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.72■□□□□ 0.75
Msh3P13705 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.72■□□□□ 0.75
Msh3P13705 Gm27275-201ENSMUST00000184318 272 ntBASIC19.72■□□□□ 0.75
Msh3P13705 Gm29791-202ENSMUST00000207888 369 ntBASIC19.72■□□□□ 0.75
Msh3P13705 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.72■□□□□ 0.75
Msh3P13705 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh3P13705 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msh3P13705 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Gm10418-201ENSMUST00000100943 576 ntBASIC19.71■□□□□ 0.75
Msh3P13705 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msh3P13705 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.71■□□□□ 0.75
Msh3P13705 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh3P13705 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms