Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.13■□□□□ 0.49
PdgfrbP05622 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PdgfrbP05622 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PdgfrbP05622 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PdgfrbP05622 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PdgfrbP05622 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PdgfrbP05622 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PdgfrbP05622 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PdgfrbP05622 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PdgfrbP05622 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PdgfrbP05622 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PdgfrbP05622 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PdgfrbP05622 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PdgfrbP05622 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.11■□□□□ 0.49
PdgfrbP05622 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.11■□□□□ 0.49
PdgfrbP05622 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.11■□□□□ 0.49
PdgfrbP05622 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.11■□□□□ 0.49
PdgfrbP05622 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PdgfrbP05622 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PdgfrbP05622 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.1■□□□□ 0.49
PdgfrbP05622 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.1■□□□□ 0.49
PdgfrbP05622 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Gm29257-201ENSMUST00000186115 639 ntBASIC18.1■□□□□ 0.49
PdgfrbP05622 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.1■□□□□ 0.49
PdgfrbP05622 Gm4968-201ENSMUST00000071458 858 ntBASIC18.1■□□□□ 0.49
PdgfrbP05622 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PdgfrbP05622 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PdgfrbP05622 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PdgfrbP05622 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PdgfrbP05622 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.09■□□□□ 0.49
PdgfrbP05622 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PdgfrbP05622 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.09■□□□□ 0.49
PdgfrbP05622 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.09■□□□□ 0.49
PdgfrbP05622 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PdgfrbP05622 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PdgfrbP05622 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PdgfrbP05622 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PdgfrbP05622 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PdgfrbP05622 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.08■□□□□ 0.48
PdgfrbP05622 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PdgfrbP05622 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PdgfrbP05622 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PdgfrbP05622 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PdgfrbP05622 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms