Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrnpP04925 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
PrnpP04925 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PrnpP04925 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.64■□□□□ 0.57
PrnpP04925 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Gm10819-201ENSMUST00000099988 561 ntBASIC18.64■□□□□ 0.57
PrnpP04925 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PrnpP04925 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PrnpP04925 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
PrnpP04925 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PrnpP04925 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PrnpP04925 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.63■□□□□ 0.57
PrnpP04925 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PrnpP04925 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
PrnpP04925 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PrnpP04925 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PrnpP04925 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.62■□□□□ 0.57
PrnpP04925 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PrnpP04925 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.62■□□□□ 0.57
PrnpP04925 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PrnpP04925 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.62■□□□□ 0.57
PrnpP04925 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PrnpP04925 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrnpP04925 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.61■□□□□ 0.57
PrnpP04925 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Gm10418-201ENSMUST00000100943 576 ntBASIC18.61■□□□□ 0.57
PrnpP04925 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 AA414768-201ENSMUST00000121924 1257 ntBASIC18.61■□□□□ 0.57
PrnpP04925 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.61■□□□□ 0.57
PrnpP04925 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PrnpP04925 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.6■□□□□ 0.57
PrnpP04925 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PrnpP04925 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PrnpP04925 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PrnpP04925 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PrnpP04925 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Gm18101-201ENSMUST00000215769 548 ntBASIC18.59■□□□□ 0.57
PrnpP04925 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.59■□□□□ 0.57
PrnpP04925 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.59■□□□□ 0.57
PrnpP04925 BC021767-201ENSMUST00000126387 1716 ntBASIC18.59■□□□□ 0.57
PrnpP04925 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PrnpP04925 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.58■□□□□ 0.57
PrnpP04925 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.58■□□□□ 0.57
PrnpP04925 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PrnpP04925 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PrnpP04925 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.58■□□□□ 0.56
PrnpP04925 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PrnpP04925 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms