Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.32■□□□□ 0.52
ShdO88834 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.32■□□□□ 0.52
ShdO88834 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
ShdO88834 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShdO88834 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ShdO88834 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.32■□□□□ 0.52
ShdO88834 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ShdO88834 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.32■□□□□ 0.52
ShdO88834 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ShdO88834 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ShdO88834 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ShdO88834 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.31■□□□□ 0.52
ShdO88834 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.31■□□□□ 0.52
ShdO88834 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ShdO88834 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.31■□□□□ 0.52
ShdO88834 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ShdO88834 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ShdO88834 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ShdO88834 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
ShdO88834 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ShdO88834 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.3■□□□□ 0.52
ShdO88834 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.3■□□□□ 0.52
ShdO88834 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShdO88834 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.29■□□□□ 0.52
ShdO88834 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
ShdO88834 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.29■□□□□ 0.52
ShdO88834 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.29■□□□□ 0.52
ShdO88834 Gm38285-201ENSMUST00000192928 922 ntBASIC18.29■□□□□ 0.52
ShdO88834 Zfp783-201ENSMUST00000095946 670 ntBASIC18.29■□□□□ 0.52
ShdO88834 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ShdO88834 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.29■□□□□ 0.52
ShdO88834 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShdO88834 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ShdO88834 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ShdO88834 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.28■□□□□ 0.52
ShdO88834 Gm27011-201ENSMUST00000182352 972 ntBASIC18.28■□□□□ 0.52
ShdO88834 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ShdO88834 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShdO88834 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.27■□□□□ 0.52
ShdO88834 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ShdO88834 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.27■□□□□ 0.52
ShdO88834 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ShdO88834 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
ShdO88834 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShdO88834 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShdO88834 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShdO88834 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShdO88834 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShdO88834 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.27■□□□□ 0.51
ShdO88834 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShdO88834 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 Flg-201ENSMUST00000050758 1488 ntBASIC18.26■□□□□ 0.51
ShdO88834 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShdO88834 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.26■□□□□ 0.51
ShdO88834 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms