Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Shoc2O88520 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Shoc2O88520 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shoc2O88520 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shoc2O88520 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shoc2O88520 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shoc2O88520 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.52■□□□□ 0.56
Shoc2O88520 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Shoc2O88520 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Shoc2O88520 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.52■□□□□ 0.56
Shoc2O88520 Gm8969-201ENSMUST00000199694 526 ntBASIC18.52■□□□□ 0.56
Shoc2O88520 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.52■□□□□ 0.56
Shoc2O88520 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shoc2O88520 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Shoc2O88520 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Shoc2O88520 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.51■□□□□ 0.55
Shoc2O88520 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Shoc2O88520 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.51■□□□□ 0.55
Shoc2O88520 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.51■□□□□ 0.55
Shoc2O88520 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shoc2O88520 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.5■□□□□ 0.55
Shoc2O88520 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.5■□□□□ 0.55
Shoc2O88520 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.5■□□□□ 0.55
Shoc2O88520 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Shoc2O88520 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shoc2O88520 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.49■□□□□ 0.55
Shoc2O88520 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Shoc2O88520 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.49■□□□□ 0.55
Shoc2O88520 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.49■□□□□ 0.55
Shoc2O88520 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.49■□□□□ 0.55
Shoc2O88520 Gm26524-201ENSMUST00000192339 390 ntBASIC18.49■□□□□ 0.55
Shoc2O88520 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Shoc2O88520 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Shoc2O88520 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
Shoc2O88520 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Shoc2O88520 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.48■□□□□ 0.55
Shoc2O88520 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
Shoc2O88520 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Shoc2O88520 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.47■□□□□ 0.55
Shoc2O88520 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Shoc2O88520 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Shoc2O88520 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.47■□□□□ 0.55
Shoc2O88520 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.47■□□□□ 0.55
Shoc2O88520 Rab3c-203ENSMUST00000224180 967 ntBASIC18.47■□□□□ 0.55
Shoc2O88520 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.47■□□□□ 0.55
Shoc2O88520 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shoc2O88520 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms